Escherichia coli strain KCJK8062

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8062 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe and exhibits motility, attributed to the presence of flagella. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. It is characterized by a cell arrangement that can be observed in singles and pairs, making it adaptable in various environments. KCJK8062 is associated with a wide range of hosts, including Homo sapiens, various livestock species (such as Bos taurus and Sus scrofa), and several other vertebrates, invertebrates, and plants. This broad host range indicates its versatile nature in ecological systems. The bacterium has significant implications for human health, as it is linked to numerous conditions, including urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and various other serious health issues such as food poisoning and hemolytic uremic syndrome. The pathogenicity of KCJK8062 underscores its role in clinical settings, where it can cause severe health effects in both humans and animals. The strain's free-living biotic relationship, coupled with its diverse habitat associations, highlights its ecological adaptability and potential for transmission across species. Understanding the traits of E. coli strain KCJK8062 is vital for addressing its public health implications and managing infections it may cause in different hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8062

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8062
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8062

Gene Summary

Adenine Count

1174843 bp

Thymine Count

1174496 bp

Guanine Count

1220491 bp

Cytosine Count

1206721 bp

Genome Length

4776551 bp

Protein-coding Genes

4274 genes

Non-Coding Genes

376 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Sulfur transfer protein, dsrcE5O91_00160Not AvailableNegative32546 - 3287512411.0
ftsh protease modulator yccaE5O91_00165Not AvailableNegative32966 - 3362523364.3
Trna-asn;Not AvailableNot AvailablePositive33438 - 33513Not Available
AttlNot AvailableNot AvailablePositive33827 - 33891Not Available
Integrase proteinE5O91_00170Not AvailableNegative34033 - 3505238792.9
duf4224 domain-containing proteinE5O91_00175Not AvailableNegative35021 - 352729608.71
EndodeoxyribonucleaseE5O91_00180Not AvailableNegative35339 - 3781092230.0
duf1482 family proteinE5O91_00185Not AvailableNegative37891 - 380947216.87
cell division inhibition protein dicbE5O91_00190Not AvailableNegative38097 - 382796914.56
hypotheticalE5O91_00195Not AvailablePositive38612 - 388709592.58

Displaying genes 1 – 10 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total