Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | E5O88_04135 | Not Available | Negative | 843502 - 844119 | 23400.8 |
| dna-binding transcriptional regulator h-ns | E5O88_04140 | Not Available | Positive | 844723 - 845136 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase galu | E5O88_04145 | Not Available | Negative | 845280 - 846188 | 32944.2 |
| two-component system response regulator rssb | E5O88_04150 | Not Available | Negative | 846390 - 847403 | 37304.5 |
| patatin-like phospholipase rssa | E5O88_04155 | Not Available | Negative | 847495 - 848400 | 33083.0 |
| ychj family protein | E5O88_04160 | Not Available | Positive | 848513 - 848968 | 16845.1 |
| formyltetrahydrofolate deformylase | E5O88_04165 | Not Available | Positive | 849021 - 849863 | 31911.6 |
| Trna-tyr | Not Available | Not Available | Positive | 850023 - 850107 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 850142 - 850226 | Not Available |
| respiratory nitrate reductase subunit gamma | E5O88_04190 | Not Available | Negative | 850766 - 851443 | 25484.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




