Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf987 domain-containing protein | E5O88_20810 | Not Available | Negative | 4231035 - 4231256 | 8409.23 |
| dna repair protein radc | E5O88_20815 | Not Available | Negative | 4231319 - 4231795 | 17688.4 |
| autotransporter barrel domain-containing lipoprotein | E5O88_20825 | Not Available | Positive | 4232411 - 4237831 | 188355.0 |
| type ii toxin-antitoxin system antitoxin hipb | E5O88_20830 | Not Available | Positive | 4238054 - 4238320 | 10016.9 |
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | E5O88_20835 | Not Available | Positive | 4238320 - 4239642 | 49278.6 |
| isas1-like element isec1 family transposase | E5O88_20850 | Not Available | Negative | 4240635 - 4241771 | 43143.0 |
| fimbrial protein | E5O88_20855 | Not Available | Positive | 4241917 - 4242459 | 18411.6 |
| fimbrial chaperone protein fimc | E5O88_20860 | Not Available | Positive | 4242820 - 4243530 | 26139.8 |
| acid resistance transcriptional activator gadx | E5O88_20870 | Not Available | Positive | 4245715 - 4246539 | 31473.3 |
| acid resistance transcriptional activator gadw | E5O88_20875 | Not Available | Positive | 4246908 - 4247636 | 28025.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




