Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | E5O88_20430 | Not Available | Positive | 4160500 - 4162383 | 70455.3 |
| type vi secretion system baseplate subunit tssg | E5O88_20435 | Not Available | Positive | 4162380 - 4163375 | 37335.4 |
| cytoplasmic protein | E5O88_20440 | Not Available | Positive | 4163386 - 4164432 | 38934.4 |
| Trna-asp | Not Available | Not Available | Positive | 4164563 - 4164639 | Not Available |
| dna polymerase iii subunit epsilon | E5O88_20450 | Not Available | Negative | 4164772 - 4165503 | 27086.5 |
| ribonuclease hi | E5O88_20455 | Not Available | Positive | 4165568 - 4166035 | 17597.9 |
| sam-dependent methyltransferase | E5O88_20460 | Not Available | Negative | 4166032 - 4166754 | 27280.7 |
| hydroxyacylglutathione hydrolase | E5O88_20465 | Not Available | Positive | 4166788 - 4167543 | 28462.0 |
| murein transglycosylase d | E5O88_20470 | Not Available | Positive | 4167615 - 4168973 | 49420.3 |
| sam-dependent methyltransferase | E5O88_20475 | Not Available | Negative | 4169021 - 4169791 | 28381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




