Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter mdtl | E5O88_20105 | Not Available | Negative | 4089176 - 4090351 | 41508.2 |
| low affinity tryptophan permease tnab | E5O88_20110 | Not Available | Negative | 4090484 - 4091731 | 45255.3 |
| tryptophanase | E5O88_20115 | Not Available | Negative | 4091822 - 4093237 | 52776.4 |
| tryptophanase leader peptide | E5O88_20120 | Not Available | Negative | 4093458 - 4093532 | 2894.56 |
| hypothetical protein | E5O88_20130 | Not Available | Negative | 4095559 - 4095628 | 2256.66 |
| carnitine operon protein caie | E5O88_20140 | Not Available | Positive | 4096317 - 4096907 | 21122.5 |
| carnitine metabolism transcriptional regulator caif | E5O88_20145 | Not Available | Negative | 4097026 - 4097421 | 15409.1 |
| carbamoyl-phosphate synthase large subunit | E5O88_20150 | Not Available | Negative | 4097682 - 4100903 | 117863.0 |
| carbamoyl-phosphate synthase small subunit | E5O88_20155 | Not Available | Negative | 4100921 - 4102069 | 41433.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | E5O88_20160 | Not Available | Negative | 4102525 - 4103346 | 28772.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




