Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | E5O88_19435 | Not Available | Negative | 3959179 - 3959658 | 16935.8 |
| xanthine dehydrogenase fad-binding subunit xdhb | E5O88_19440 | Not Available | Negative | 3959655 - 3960533 | 31572.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | E5O88_19445 | Not Available | Negative | 3960544 - 3962841 | 82634.9 |
| lysm peptidoglycan-binding domain-containing protein | E5O88_19450 | Not Available | Positive | 3963256 - 3964011 | 26570.0 |
| Trna-gly | Not Available | Not Available | Positive | 3964090 - 3964163 | Not Available |
| hypothetical protein | E5O88_19460 | Not Available | Positive | 3964397 - 3966007 | 60323.5 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | E5O88_19470 | Not Available | Positive | 3967077 - 3967742 | 24648.6 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | E5O88_19475 | Not Available | Positive | 3967752 - 3968012 | 9429.87 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | E5O88_19480 | Not Available | Positive | 3968014 - 3968781 | 28239.8 |
| flagellar biosynthesis protein flhb | E5O88_19485 | Not Available | Positive | 3968790 - 3969521 | 28421.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




