Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector | E5O88_15955 | Not Available | Negative | 3247797 - 3248366 | 21495.4 |
| thiamine abc transporter substrate binding subunit | E5O88_15960 | Not Available | Positive | 3248738 - 3249721 | 36165.2 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | E5O88_15965 | Not Available | Positive | 3249697 - 3251307 | 59349.5 |
| thiamine abc transporter atp-binding protein thiq | E5O88_15970 | Not Available | Positive | 3251291 - 3251989 | 25026.6 |
| deda family protein | E5O88_15975 | Not Available | Negative | 3252103 - 3252867 | 28213.8 |
| arabinose operon transcriptional regulator arac | E5O88_15980 | Not Available | Negative | 3252953 - 3253831 | 33385.8 |
| ribulokinase | E5O88_15985 | Not Available | Positive | 3254170 - 3255870 | 61186.7 |
| l-arabinose isomerase | E5O88_15990 | Not Available | Positive | 3255881 - 3257383 | 56092.2 |
| l-ribulose-5-phosphate 4-epimerase | E5O88_15995 | Not Available | Positive | 3257807 - 3258502 | 25504.3 |
| dna polymerase ii | E5O88_16000 | Not Available | Positive | 3258577 - 3260928 | 90124.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




