Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopentenyl-diphosphate delta-isomerase | E5O88_14100 | Not Available | Positive | 2900104 - 2900652 | 20452.3 |
| lysine--trna ligase | E5O88_14105 | Not Available | Negative | 2900696 - 2902213 | 57606.8 |
| peptide chain release factor 2 | E5O88_14110 | Not Available | Negative | 2902223 - 2903321 | 41222.9 |
| single-stranded-dna-specific exonuclease recj | E5O88_14115 | Not Available | Negative | 2903412 - 2905145 | 63336.6 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | E5O88_14120 | Not Available | Negative | 2905151 - 2905861 | 25639.2 |
| tyrosine recombinase xerd | E5O88_14125 | Not Available | Negative | 2905886 - 2906782 | 34248.4 |
| flavodoxin fldb | E5O88_14130 | Not Available | Positive | 2906894 - 2907415 | 19701.2 |
| toxin cpta | E5O88_14135 | Not Available | Negative | 2907455 - 2907862 | 16065.0 |
| fad assembly factor sdhe | E5O88_14140 | Not Available | Negative | 2907843 - 2908109 | 10547.7 |
| pp_02772 | E5O88_14145 | Not Available | Positive | 2908352 - 2909332 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




