Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propanediol utilization microcompartment protein pduu | E5O88_13690 | Not Available | Positive | 2811140 - 2811490 | 12444.2 |
| eutp/pduv family microcompartment system protein | E5O88_13695 | Not Available | Positive | 2811495 - 2811938 | 16043.3 |
| duf496 family protein | E5O88_13700 | Not Available | Negative | 2812039 - 2812368 | 12778.5 |
| fusc family protein | E5O88_13705 | Not Available | Negative | 2812540 - 2813598 | 39957.7 |
| dna gyrase inhibitor sbmc | E5O88_13710 | Not Available | Negative | 2813797 - 2814270 | 18068.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | E5O88_13715 | Not Available | Negative | 2814389 - 2815555 | 43334.5 |
| exodeoxyribonuclease i | E5O88_13720 | Not Available | Positive | 2815744 - 2817171 | 54558.7 |
| hypothetical protein | E5O88_13725 | Not Available | Negative | 2817214 - 2817441 | 8092.61 |
| yeee/yede family protein | E5O88_13730 | Not Available | Negative | 2817455 - 2818513 | 38028.6 |
| putrescine/proton symporter plap | E5O88_13735 | Not Available | Negative | 2818692 - 2820050 | 49540.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




