Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf554 domain-containing protein | E5O88_13085 | Not Available | Negative | 2693153 - 2693860 | 24695.5 |
| ornithine decarboxylase | E5O88_13090 | Not Available | Positive | 2694259 - 2696394 | 79538.7 |
| nucleoside permease | E5O88_13095 | Not Available | Negative | 2696444 - 2697700 | 46377.9 |
| membrane-bound lytic murein transglycosylase mltc | E5O88_13100 | Not Available | Negative | 2697902 - 2698981 | 40114.8 |
| oxidative damage protection protein | E5O88_13105 | Not Available | Negative | 2699046 - 2699321 | 10953.2 |
| adenine dna glycosylase | E5O88_13110 | Not Available | Negative | 2699349 - 2700401 | 39151.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | E5O88_13115 | Not Available | Positive | 2700562 - 2701281 | 27308.9 |
| duf469 domain-containing protein | E5O88_13120 | Not Available | Positive | 2701281 - 2701607 | 12881.2 |
| duf2884 family protein | E5O88_13125 | Not Available | Positive | 2701791 - 2702510 | 26430.8 |
| l-asparaginase 2 | E5O88_13130 | Not Available | Positive | 2702686 - 2703732 | 36837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




