Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | E5O88_12830 | Not Available | Positive | 2641468 - 2642085 | 21391.8 |
| galactonate dehydratase | E5O88_12835 | Not Available | Positive | 2642082 - 2643230 | 42525.3 |
| mfs transporter | E5O88_12840 | Not Available | Positive | 2643350 - 2644642 | 47061.4 |
| colicin m resistance protein | E5O88_12845 | Not Available | Negative | 2644639 - 2645703 | 40206.6 |
| duf3748 domain-containing protein | E5O88_12850 | Not Available | Positive | 2645771 - 2647018 | 46163.1 |
| ycek/yidq family lipoprotein | E5O88_12855 | Not Available | Negative | 2647020 - 2647352 | 11826.3 |
| heat shock chaperone ibpa | E5O88_12860 | Not Available | Positive | 2647657 - 2648070 | 15774.6 |
| heat shock chaperone ibpb | E5O88_12865 | Not Available | Positive | 2648182 - 2648610 | 16008.0 |
| putative transporter | E5O88_12870 | Not Available | Positive | 2648806 - 2650467 | 58970.9 |
| gntr family transcriptional regulator | E5O88_12875 | Not Available | Negative | 2650464 - 2651180 | 27428.6 |
Pathways
1177 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




