Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1435 domain-containing protein | E5O88_12720 | Not Available | Negative | 2624125 - 2624361 | 8673.37 |
| hydroxamate siderophore iron reductase fhuf | E5O88_12725 | Not Available | Positive | 2624502 - 2625290 | 30094.3 |
| dna-binding transcriptional activator bglj | E5O88_12730 | Not Available | Negative | 2625328 - 2626005 | 25593.1 |
| is1 family transposase | E5O88_12740 | Not Available | Negative | 2626140 - 2626251 | 4273.23 |
| hypothetical protein | E5O88_12745 | Not Available | Positive | 2626252 - 2626348 | 3834.38 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | E5O88_12755 | Not Available | Negative | 2626888 - 2628252 | 49215.7 |
| membrane protein insertase yidc | E5O88_12760 | Not Available | Negative | 2628358 - 2630004 | 61529.4 |
| membrane protein insertion efficiency factor yidd | E5O88_12765 | Not Available | Negative | 2630007 - 2630264 | 9381.61 |
| ribonuclease p protein component | E5O88_12770 | Not Available | Negative | 2630228 - 2630587 | 13790.0 |
| 50s ribosomal protein l34 | E5O88_12775 | Not Available | Negative | 2630604 - 2630744 | 5380.74 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




