Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation peptidase hyci | E5O88_01070 | Not Available | Negative | 216503 - 216973 | 17057.6 |
| formate hydrogenlyase maturation protein hych | E5O88_01075 | Not Available | Negative | 216966 - 217376 | 15465.5 |
| formate hydrogenlyase subunit hycg | E5O88_01080 | Not Available | Negative | 217373 - 218140 | 28015.7 |
| formate hydrogenlyase subunit hycf | E5O88_01085 | Not Available | Negative | 218140 - 218682 | 20329.4 |
| hydrogenase large subunit | E5O88_01090 | Not Available | Negative | 218692 - 220401 | 64984.1 |
| formate hydrogenlyase subunit hycd | E5O88_01095 | Not Available | Negative | 220419 - 221342 | 33065.4 |
| formate hydrogenlyase subunit 3 | E5O88_01100 | Not Available | Negative | 221345 - 223171 | 64143.2 |
| 4fe-4s dicluster domain-containing protein | E5O88_01105 | Not Available | Negative | 223168 - 223779 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | E5O88_01110 | Not Available | Negative | 223904 - 224365 | 17627.9 |
| hypothetical protein | E5O88_01115 | Not Available | Negative | 224453 - 224671 | 8037.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




