Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-n-methylase | E5O88_12415 | Not Available | Positive | 2564621 - 2565550 | 35204.6 |
| glycosyltransferase | E5O88_12420 | Not Available | Positive | 2565729 - 2568173 | 92986.4 |
| hypothetical protein | E5O88_12425 | Not Available | Positive | 2568655 - 2569056 | 15359.4 |
| duf1311 domain-containing protein | E5O88_12430 | Not Available | Positive | 2569037 - 2569549 | 19389.1 |
| adhesin | E5O88_12435 | Not Available | Positive | 2569572 - 2570048 | 17302.8 |
| hypothetical protein | E5O88_12440 | Not Available | Positive | 2570178 - 2570789 | 22702.9 |
| is1 family transposase | E5O88_12445 | Not Available | Negative | 2570823 - 2570894 | 2357.77 |
| transcriptional activator nhar | E5O88_12455 | Not Available | Negative | 2571216 - 2572121 | 34258.3 |
| na+/h+ antiporter nhaa | E5O88_12460 | Not Available | Negative | 2572181 - 2573347 | 41376.3 |
| type i toxin-antitoxin system toxin mokc | E5O88_12465 | Not Available | Positive | 2573875 - 2574084 | 7742.74 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




