Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | E5O88_12210 | Not Available | Positive | 2533107 - 2533583 | 18125.9 |
| duf987 domain-containing protein | E5O88_12215 | Not Available | Positive | 2533592 - 2533813 | 8581.41 |
| type iv toxin-antitoxin system antitoxin yafw | E5O88_12220 | Not Available | Positive | 2533832 - 2534149 | 11983.3 |
| type iv toxin-antitoxin system toxin ykfi | E5O88_12225 | Not Available | Positive | 2534170 - 2534511 | 12893.7 |
| Trna-thr | Not Available | Not Available | Positive | 2534894 - 2534969 | Not Available |
| glutamate-5-semialdehyde dehydrogenase | E5O88_12235 | Not Available | Negative | 2535084 - 2536337 | 44634.7 |
| glutamate 5-kinase | E5O88_12240 | Not Available | Negative | 2536349 - 2537452 | 39058.9 |
| phosphoporin phoe | E5O88_12245 | Not Available | Positive | 2537740 - 2538795 | 38968.1 |
| sigma factor-binding protein crl | E5O88_12250 | Not Available | Negative | 2538834 - 2539235 | 15656.7 |
| esterase frsa | E5O88_12255 | Not Available | Negative | 2539293 - 2540537 | 46953.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




