Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxyethylcatechol 2,3-dioxygenase | E5O88_12140 | Not Available | Negative | 2522944 - 2523888 | 33980.7 |
| trypsin-like serine protease | E5O88_12155 | Not Available | Positive | 2525258 - 2526409 | 40418.8 |
| gtpase family protein | E5O88_12170 | Not Available | Positive | 2528315 - 2529178 | 31929.5 |
| duf945 domain-containing protein | E5O88_12175 | Not Available | Positive | 2529270 - 2530091 | 31083.2 |
| wyl domain-containing protein | E5O88_12180 | Not Available | Positive | 2530308 - 2531009 | 26439.2 |
| hypothetical protein | E5O88_12185 | Not Available | Positive | 2531050 - 2531286 | 7659.89 |
| hypothetical protein | E5O88_12190 | Not Available | Positive | 2531286 - 2531729 | 16843.0 |
| hypothetical protein | E5O88_12195 | Not Available | Positive | 2531752 - 2532219 | 17010.6 |
| duf905 domain-containing protein | E5O88_12200 | Not Available | Positive | 2532296 - 2532535 | 9014.55 |
| antirestriction protein | E5O88_12205 | Not Available | Positive | 2532633 - 2533091 | 17432.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




