Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | E5O88_11875 | Not Available | Positive | 2474029 - 2474829 | 29590.3 |
| aldehyde dehydrogenase | E5O88_11880 | Not Available | Positive | 2475026 - 2476465 | 52188.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | E5O88_11885 | Not Available | Negative | 2476507 - 2477508 | 35749.7 |
| cytochrome b561 | E5O88_11890 | Not Available | Positive | 2477697 - 2478227 | 20287.7 |
| hypothetical protein | E5O88_11895 | Not Available | Positive | 2478472 - 2478645 | 5876.19 |
| type i toxin-antitoxin system toxin hokb | E5O88_11900 | Not Available | Negative | 2478717 - 2478866 | 5615.18 |
| methyl-accepting chemotaxis protein trg | E5O88_11910 | Not Available | Positive | 2479255 - 2480895 | 58872.3 |
| lysr family transcriptional regulator | E5O88_11915 | Not Available | Negative | 2480933 - 2481856 | 33402.6 |
| voc family protein | E5O88_11920 | Not Available | Positive | 2482073 - 2483416 | 51059.7 |
| glucan biosynthesis protein d | E5O88_11925 | Not Available | Positive | 2483641 - 2485296 | 62771.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




