Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | E5O88_11775 | Not Available | Positive | 2447422 - 2447958 | 20116.4 |
| carbonate dehydratase | E5O88_11780 | Not Available | Negative | 2447999 - 2448661 | 25098.2 |
| abc transporter atp-binding protein | E5O88_11785 | Not Available | Positive | 2448770 - 2449696 | 34649.2 |
| abc transporter permease | E5O88_11790 | Not Available | Positive | 2449693 - 2450463 | 28517.9 |
| pts sugar transporter subunit iia | E5O88_11795 | Not Available | Positive | 2450568 - 2451008 | 16527.0 |
| polysaccharide deacetylase family protein | E5O88_11800 | Not Available | Positive | 2451072 - 2452301 | 46355.9 |
| aspartate 1-decarboxylase | E5O88_11805 | Not Available | Negative | 2452305 - 2452685 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | E5O88_11810 | Not Available | Positive | 2452959 - 2453831 | 33709.8 |
| hypothetical protein | E5O88_11815 | Not Available | Positive | 2453900 - 2454109 | 8236.79 |
| pantoate--beta-alanine ligase | E5O88_11820 | Not Available | Negative | 2454205 - 2455056 | 31569.6 |
Pathways
858 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




