Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | E5O88_11425 | Not Available | Negative | 2359695 - 2363012 | 123892.0 |
| uridine kinase | E5O88_11430 | Not Available | Positive | 2363330 - 2363971 | 24354.6 |
| dctp deaminase | E5O88_11435 | Not Available | Positive | 2364063 - 2364644 | 21222.4 |
| outer membrane assembly protein asma | E5O88_11440 | Not Available | Positive | 2364666 - 2366519 | 68950.9 |
| terc family protein | E5O88_11445 | Not Available | Negative | 2366979 - 2368562 | 59438.9 |
| polysaccharide export protein | E5O88_11450 | Not Available | Positive | 2369220 - 2370359 | 41912.4 |
| low molecular weight protein-tyrosine-phosphatase wzb | E5O88_11455 | Not Available | Positive | 2370365 - 2370808 | 16709.3 |
| tyrosine-protein kinase wzc | E5O88_11460 | Not Available | Positive | 2370811 - 2372973 | 79346.7 |
| colanic acid biosynthesis glycosyltransferase wcaa | E5O88_11465 | Not Available | Positive | 2373066 - 2373905 | 33037.5 |
| colanic acid biosynthesis acetyltransferase wcab | E5O88_11470 | Not Available | Positive | 2373908 - 2374396 | 17616.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




