Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | E5O88_11375 | Not Available | Positive | 2351886 - 2351942 | 2063.86 |
| type i toxin-antitoxin system ibs family toxin | E5O88_11380 | Not Available | Positive | 2352214 - 2352270 | 2079.86 |
| type i toxin-antitoxin system ibs family toxin | E5O88_11385 | Not Available | Positive | 2352542 - 2352598 | 2102.89 |
| type i toxin-antitoxin system toxin ibsa | E5O88_11390 | Not Available | Positive | 2352871 - 2352930 | 2232.03 |
| vwa domain-containing protein | E5O88_11395 | Not Available | Positive | 2353151 - 2353810 | 24123.8 |
| protein phosphatase 2c domain-containing protein | E5O88_11400 | Not Available | Positive | 2353807 - 2354568 | 27261.6 |
| duf2314 domain-containing protein | E5O88_11405 | Not Available | Negative | 2354633 - 2355094 | 17400.8 |
| protein kinase yegi | E5O88_11410 | Not Available | Positive | 2355294 - 2357240 | 71617.7 |
| molecular chaperone | E5O88_11415 | Not Available | Negative | 2357252 - 2358604 | 49273.0 |
| dna-3-methyladenine glycosylase 2 | E5O88_11420 | Not Available | Positive | 2358738 - 2359586 | 31294.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




