Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | E5O88_11125 | Not Available | Negative | 2297005 - 2298114 | 39492.7 |
| outer membrane lipoprotein slyb | E5O88_11130 | Not Available | Positive | 2298388 - 2298855 | 15602.7 |
| transcriptional regulator slya | E5O88_11135 | Not Available | Negative | 2298902 - 2299336 | 16354.0 |
| duf1656 domain-containing protein | E5O88_11140 | Not Available | Positive | 2299537 - 2299773 | 8891.33 |
| hlyd family secretion protein | E5O88_11145 | Not Available | Positive | 2299776 - 2300633 | 31497.5 |
| fusc family protein | E5O88_11150 | Not Available | Positive | 2300633 - 2302645 | 75200.9 |
| superoxide dismutase | E5O88_11155 | Not Available | Negative | 2302646 - 2303167 | 17682.0 |
| aldo/keto reductase family oxidoreductase | E5O88_11160 | Not Available | Negative | 2303248 - 2304144 | 33677.6 |
| duf1289 domain-containing protein | E5O88_11165 | Not Available | Negative | 2304193 - 2304432 | 9359.15 |
| tetr/acrr family transcriptional regulator | E5O88_11170 | Not Available | Positive | 2304535 - 2305134 | 22253.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




