Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxd | E5O88_11075 | Not Available | Positive | 2287654 - 2288712 | 38142.4 |
| electron transport complex subunit rsxg | E5O88_11080 | Not Available | Positive | 2288716 - 2289336 | 21913.1 |
| electron transport complex subunit e | E5O88_11085 | Not Available | Positive | 2289340 - 2290035 | 24518.6 |
| endonuclease iii | E5O88_11090 | Not Available | Positive | 2290035 - 2290670 | 23563.7 |
| dipeptide/tripeptide permease dtpa | E5O88_11095 | Not Available | Positive | 2291281 - 2292783 | 54008.4 |
| glutathione transferase gsta | E5O88_11100 | Not Available | Positive | 2292889 - 2293494 | 22869.6 |
| pyridoxal kinase pdxy | E5O88_11105 | Not Available | Negative | 2293538 - 2294398 | 31192.8 |
| tyrosine--trna ligase | E5O88_11110 | Not Available | Negative | 2294460 - 2295734 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | E5O88_11115 | Not Available | Negative | 2295863 - 2296519 | 25560.6 |
| c-type lysozyme inhibitor | E5O88_11120 | Not Available | Negative | 2296578 - 2296907 | 12495.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




