Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | E5O88_10815 | Not Available | Positive | 2242499 - 2243449 | 35081.2 |
| rna chaperone hfq | E5O88_10820 | Not Available | Positive | 2243535 - 2243843 | 11167.0 |
| gtpase hflx | E5O88_10825 | Not Available | Positive | 2243920 - 2245200 | 48329.0 |
| ftsh protease activity modulator hflk | E5O88_10830 | Not Available | Positive | 2245286 - 2246545 | 45547.5 |
| protease modulator hflc | E5O88_10835 | Not Available | Positive | 2246548 - 2247552 | 37652.0 |
| duf2065 domain-containing protein | E5O88_10840 | Not Available | Positive | 2247634 - 2247831 | 7166.26 |
| adenylosuccinate synthase | E5O88_10845 | Not Available | Positive | 2247935 - 2249233 | 47347.7 |
| hth-type transcriptional repressor nsrr | E5O88_10850 | Not Available | Positive | 2249438 - 2249863 | 15594.0 |
| ribonuclease r | E5O88_10855 | Not Available | Positive | 2249902 - 2252343 | 92114.5 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | E5O88_10860 | Not Available | Positive | 2252524 - 2253255 | 26558.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




