Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | E5O88_10360 | Not Available | Negative | 2146468 - 2146890 | 15604.9 |
| yaeq family protein | E5O88_10365 | Not Available | Negative | 2146887 - 2147432 | 20858.7 |
| yaep family protein | E5O88_10370 | Not Available | Positive | 2147598 - 2147798 | 7214.59 |
| rho-binding antiterminator | E5O88_10375 | Not Available | Positive | 2147785 - 2148045 | 9698.45 |
| trna lysidine(34) synthetase tils | E5O88_10380 | Not Available | Negative | 2148094 - 2149392 | 47960.7 |
| voc family protein | E5O88_10385 | Not Available | Negative | 2149457 - 2149846 | 14707.4 |
| lysine decarboxylase ldcc | E5O88_10390 | Not Available | Negative | 2149903 - 2152044 | 80608.9 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | E5O88_10395 | Not Available | Negative | 2152143 - 2153102 | 35289.6 |
| dna polymerase iii subunit alpha | E5O88_10400 | Not Available | Negative | 2153115 - 2156597 | 129898.0 |
| ribonuclease hii | E5O88_10405 | Not Available | Negative | 2156634 - 2157230 | 21527.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




