Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | E5O88_10005 | Not Available | Positive | 2068180 - 2069061 | 33282.3 |
| atp-dependent rna helicase srmb | E5O88_10010 | Not Available | Negative | 2069270 - 2070604 | 49902.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | E5O88_10015 | Not Available | Positive | 2070736 - 2071473 | 27271.4 |
| l-aspartate oxidase | E5O88_10020 | Not Available | Negative | 2071458 - 2073080 | 60309.0 |
| rpoe leader peptide rsed | E5O88_10025 | Not Available | Positive | 2073336 - 2073491 | 6229.83 |
| rna polymerase sigma factor rpoe | E5O88_10030 | Not Available | Positive | 2073488 - 2074063 | 21697.0 |
| anti-sigma-e factor rsea | E5O88_10035 | Not Available | Positive | 2074096 - 2074746 | 24322.8 |
| sigma-e factor regulatory protein rseb | E5O88_10040 | Not Available | Positive | 2074746 - 2075702 | 35682.6 |
| soxr-reducing system protein rsec | E5O88_10045 | Not Available | Positive | 2075699 - 2076178 | 16656.3 |
| elongation factor 4 | E5O88_10050 | Not Available | Positive | 2076376 - 2078175 | 66574.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




