Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose operon transcription regulator xylr | E5O88_09835 | Not Available | Positive | 2034533 - 2035711 | 44871.7 |
| protein bax | E5O88_09840 | Not Available | Negative | 2035819 - 2036643 | 30869.3 |
| alpha-amylase | E5O88_09845 | Not Available | Positive | 2036963 - 2038993 | 75803.5 |
| valine--pyruvate transaminase | E5O88_09850 | Not Available | Positive | 2039171 - 2040424 | 46691.9 |
| 4fe-4s dicluster domain-containing protein | E5O88_09855 | Not Available | Negative | 2040575 - 2041048 | 17421.1 |
| iclr family transcriptional regulator yiaj | E5O88_09860 | Not Available | Negative | 2041150 - 2041998 | 31068.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | E5O88_09865 | Not Available | Positive | 2042199 - 2043197 | 36588.9 |
| yhch/yjgk/yial family protein | E5O88_09870 | Not Available | Positive | 2043209 - 2043676 | 17533.0 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | E5O88_09875 | Not Available | Positive | 2043794 - 2044267 | 17516.9 |
| 2,3-diketo-l-gulonate transporter large permease yian | E5O88_09880 | Not Available | Positive | 2044270 - 2045547 | 45383.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




