Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate c-acetyltransferase | E5O88_08905 | Not Available | Negative | 1830571 - 1832853 | 85355.0 |
| formate transporter foca | E5O88_08910 | Not Available | Negative | 1832908 - 1833765 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | E5O88_08915 | Not Available | Negative | 1834171 - 1835931 | 65715.0 |
| duf421 domain-containing protein | E5O88_08920 | Not Available | Positive | 1836061 - 1836753 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | E5O88_08925 | Not Available | Positive | 1836952 - 1838040 | 39842.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | E5O88_08930 | Not Available | Positive | 1838111 - 1839394 | 46098.5 |
| metalloprotease | E5O88_08935 | Not Available | Positive | 1839563 - 1840327 | 26738.7 |
| (d)cmp kinase | E5O88_08940 | Not Available | Positive | 1840500 - 1841183 | 24735.7 |
| 30s ribosomal protein s1 | E5O88_08945 | Not Available | Positive | 1841294 - 1842967 | 61161.5 |
| integration host factor subunit beta | E5O88_08950 | Not Available | Positive | 1843127 - 1843411 | 10651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




