Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii oxidase subunit cbdx | E5O88_08485 | Not Available | Negative | 1740560 - 1740652 | 3597.68 |
| cytochrome d ubiquinol oxidase subunit ii | E5O88_08490 | Not Available | Negative | 1740665 - 1741801 | 42441.4 |
| cytochrome bd-ii oxidase subunit 1 | E5O88_08495 | Not Available | Negative | 1741813 - 1743357 | 57996.3 |
| hydrogenase expression/formation protein | E5O88_08500 | Not Available | Negative | 1743491 - 1744348 | 31446.5 |
| hydrogenase-1 operon protein hyae | E5O88_08505 | Not Available | Negative | 1744345 - 1744743 | 14966.8 |
| hydrogenase 1 maturation protease | E5O88_08510 | Not Available | Negative | 1744740 - 1745327 | 21567.8 |
| ni/fe-hydrogenase b-type cytochrome subunit | E5O88_08515 | Not Available | Negative | 1745324 - 1746031 | 27598.8 |
| ni/fe-hydrogenase large subunit | E5O88_08520 | Not Available | Negative | 1746050 - 1747843 | 66199.0 |
| hydrogenase 1 small subunit | E5O88_08525 | Not Available | Negative | 1747840 - 1748958 | 40683.6 |
| Trna-ser | Not Available | Not Available | Positive | 1749384 - 1749471 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




