Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1098927 bp
Thymine Count
1092481 bp
Guanine Count
1130964 bp
Cytosine Count
1145514 bp
Genome Length
4467906 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5O88_07865 | Not Available | Positive | 1607908 - 1608099 | 6874.62 |
| hypothetical protein | E5O88_07870 | Not Available | Negative | 1608135 - 1609580 | 54574.7 |
| integrase | E5O88_07875 | Not Available | Negative | 1609694 - 1611052 | 51750.3 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | E5O88_07880 | Not Available | Negative | 1611307 - 1611579 | 10134.5 |
| nickel/cobalt efflux protein rcna | E5O88_07885 | Not Available | Positive | 1611700 - 1612545 | 31269.2 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | E5O88_07890 | Not Available | Positive | 1612767 - 1613105 | 12440.8 |
| pilus assembly protein | E5O88_07895 | Not Available | Negative | 1613187 - 1614221 | 37334.7 |
| fimbrial biogenesis outer membrane usher protein | E5O88_07900 | Not Available | Negative | 1614232 - 1616712 | 92502.2 |
| fimbrial assembly protein | E5O88_07905 | Not Available | Negative | 1616728 - 1617402 | 24838.3 |
| type 1 fimbrial protein | E5O88_07910 | Not Available | Negative | 1617483 - 1618025 | 19075.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




