Flavivirga rizhaonensis strain RZ03

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavivirga

Description

Flavivirga rizhaonensis strain RZ03 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is part of the Flavivirga genus, which is known for its diverse metabolic capabilities. The complete genomic data for strain RZ03 can be accessed under the accession number SRSO00000000.1. As a Gram-negative organism, Flavivirga rizhaonensis exhibits a characteristic cell wall structure, which includes a thin peptidoglycan layer surrounded by an outer membrane. This structural feature is essential for its survival in various environments and influences its interactions with other microorganisms. The presence of only one replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in nutrient utilization. Understanding the genomic characteristics of strain RZ03 can provide insights into its ecological role, particularly in environments where members of the Flavivirga genus are found. Overall, Flavivirga rizhaonensis strain RZ03 exemplifies the diversity of microbial life and its potential ecological significance. The study of its metabolic pathways and interactions within its habitat can enhance our comprehension of microbial ecology and the roles these organisms play in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavivirga
SpeciesFlavivirga rizhaonensis
Strainstrain RZ03

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavivirga rizhaonensis strain RZ03

Gene Summary

Adenine Count

1663176 bp

Thymine Count

1665550 bp

Guanine Count

798785 bp

Cytosine Count

783665 bp

Genome Length

4911176 bp

Protein-coding Genes

4052 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitEM932_04420Not AvailableNegative1124013 - 1127210118284.0
hlyd family efflux transporter periplasmic adaptor subunitEM932_04425Not AvailableNegative1127215 - 112833041600.9
marr family transcriptional regulatorEM932_04430Not AvailableNegative1128337 - 112880118168.2
m1 family peptidaseEM932_04435Not AvailableNegative1128960 - 113095177885.7
t9ss type b sorting domain-containing proteinEM932_04440Not AvailablePositive1131103 - 113345487358.1
atp-dependent dna helicase recgEM932_04445Not AvailablePositive1133523 - 113568282078.0
t9ss type a sorting domain-containing proteinEM932_04450Not AvailablePositive1135774 - 11360409769.96
pp_00885EM932_04455Not AvailablePositive1136105 - 1136686Not Available
duf2911 domain-containing proteinEM932_04460Not AvailableNegative1136750 - 113783840354.2
dna mismatch repair protein mutsEM932_04465Not AvailablePositive1138038 - 114020682667.5

Displaying genes 881 – 890 of 4097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.