Flavivirga rizhaonensis strain RZ03

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavivirga

Description

Flavivirga rizhaonensis strain RZ03 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is part of the Flavivirga genus, which is known for its diverse metabolic capabilities. The complete genomic data for strain RZ03 can be accessed under the accession number SRSO00000000.1. As a Gram-negative organism, Flavivirga rizhaonensis exhibits a characteristic cell wall structure, which includes a thin peptidoglycan layer surrounded by an outer membrane. This structural feature is essential for its survival in various environments and influences its interactions with other microorganisms. The presence of only one replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in nutrient utilization. Understanding the genomic characteristics of strain RZ03 can provide insights into its ecological role, particularly in environments where members of the Flavivirga genus are found. Overall, Flavivirga rizhaonensis strain RZ03 exemplifies the diversity of microbial life and its potential ecological significance. The study of its metabolic pathways and interactions within its habitat can enhance our comprehension of microbial ecology and the roles these organisms play in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavivirga
SpeciesFlavivirga rizhaonensis
Strainstrain RZ03

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavivirga rizhaonensis strain RZ03

Gene Summary

Adenine Count

1663176 bp

Thymine Count

1665550 bp

Guanine Count

798785 bp

Cytosine Count

783665 bp

Genome Length

4911176 bp

Protein-coding Genes

4052 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s20EM932_01905Not AvailablePositive525705 - 5259569344.58
hypothetical proteinEM932_01910Not AvailablePositive526162 - 52652413866.6
alpha-ketoglutarate-dependent dioxygenase alkbEM932_01915Not AvailableNegative526647 - 52725823655.6
metal-binding proteinEM932_01920Not AvailableNegative527245 - 5274909609.9
methylated-dna--[protein]-cysteine s-methyltransferaseEM932_01930Not AvailableNegative527685 - 52852731603.1
transcription termination factor rhoEM932_01935Not AvailableNegative528726 - 53038462688.8
duf4293 family proteinEM932_01940Not AvailablePositive530595 - 53100515228.2
metallophosphoesteraseEM932_01945Not AvailableNegative531198 - 53169218977.1
trna pseudouridine(38-40) synthase truaEM932_01950Not AvailablePositive531956 - 53270528886.7
abc transporter atp-binding proteinEM932_01955Not AvailablePositive532698 - 53446467168.4

Displaying genes 381 – 390 of 4097 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.