Neolewinella litorea strain HSMS-39

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Saprospiria

Order

Saprospirales

Family

Lewinellaceae

Genus

Neolewinella

Description

Neolewinella litorea strain HSMS-39 is characterized as a Gram-negative, rod-shaped bacterium. This classification indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a distinctive feature of Gram-negative bacteria. The strain has a single replicon, suggesting a streamlined genomic organization that may influence its replication and adaptability. The strain is cataloged with the accession number SRSF00000000.1, which provides a reference point for further genomic studies and comparisons with other bacterial strains. This accession allows for the retrieval of specific genomic data, facilitating research into the metabolic pathways, ecological roles, and potential applications of Neolewinella litorea. Understanding the characteristics of Neolewinella litorea strain HSMS-39 contributes to the broader knowledge of microbial diversity and ecology. The Gram-negative nature and rod shape may imply specific ecological niches where this bacterium can thrive, possibly in aquatic environments given its species name "litorea." Such habitats often support diverse microbial communities, and the presence of Neolewinella litorea could play a role in nutrient cycling or interactions with other microorganisms. In summary, Neolewinella litorea strain HSMS-39 presents key traits such as its Gram-negative classification, rod shape, and unique genomic characteristics. These attributes are essential for understanding its ecological contributions and potential applications in microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSaprospiria
OrderSaprospirales
FamilyLewinellaceae
GenusNeolewinella
SpeciesNeolewinella litorea
Strainstrain HSMS-39

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neolewinella litorea strain HSMS-39 contig39, whole genome shotgun

Gene Summary

Adenine Count

878996 bp

Thymine Count

883111 bp

Guanine Count

1319279 bp

Cytosine Count

1322418 bp

Genome Length

4403848 bp

Protein-coding Genes

3527 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6,7-dimethyl-8-ribityllumazine synthaseE4021_01145Not AvailablePositive265875 - 26639618430.0
exodeoxyribonuclease vii large subunitE4021_01150Not AvailableNegative266393 - 26761945273.7
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfE4021_01155Not AvailablePositive267746 - 26859131861.4
phytanoyl-coa dioxygenase family proteinE4021_01160Not AvailablePositive268622 - 26953034807.8
yggs family pyridoxal phosphate-dependent enzymeE4021_01165Not AvailableNegative269521 - 27019225458.3
hypothetical proteinE4021_01170Not AvailablePositive270376 - 2705646956.52
fkbp-type peptidyl-prolyl cis-trans isomeraseE4021_01175Not AvailableNegative270557 - 27121623725.9
peptide-methionine (s)-s-oxide reductase msraE4021_01180Not AvailableNegative271213 - 27180622362.2
hypothetical proteinE4021_01185Not AvailablePositive271905 - 274763106442.0
arginine--trna ligaseE4021_01190Not AvailablePositive274784 - 27663170032.1

Displaying genes 241 – 250 of 3579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.