Pseudoalteromonas sp. MEBiC 03607 3607_2_1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. MEBiC 03607 3607_2_1 is characterized as a rod-shaped bacterium. This morphological trait is significant as it can influence the organism's motility, surface attachment, and overall ecological interactions. The organism possesses a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability and efficiency in its environment. The accession number for Pseudoalteromonas sp. MEBiC 03607 is SRRY00000000.1, which serves as a reference for genomic sequencing and further research into its genetic makeup. This accession allows researchers to access genetic information that could provide insights into the metabolic capabilities and ecological roles of this species. Ecologically, Pseudoalteromonas species are known to inhabit marine environments, where they often play roles in nutrient cycling and can exhibit various interactions with other marine organisms. Understanding the traits of Pseudoalteromonas sp. MEBiC 03607 3607_2_1, including its rod shape and genetic organization, can help elucidate its potential functions in marine ecosystems, such as biodegradation, bioremediation, or symbiotic relationships. This highlights the importance of studying microbial species like Pseudoalteromonas sp. MEBiC 03607 within the broader context of marine microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. MEBiC 03607
Strain3607_2_1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. MEBiC 03607 3607_2_1, whole genome shotgun

Gene Summary

Adenine Count

1343790 bp

Thymine Count

1348520 bp

Guanine Count

940238 bp

Cytosine Count

929351 bp

Genome Length

4561899 bp

Protein-coding Genes

3957 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilin biogenesis proteinE5N72_13660Not AvailableNegative2968619 - 2971792116089.0
pilin biogenesis proteinE5N72_13665Not AvailableNegative2972311 - 2975388112945.0
pilus assembly protein pilxE5N72_13670Not AvailableNegative2975402 - 297588416919.6
prepilin-type n-terminal cleavage/methylation domain-containing proteinE5N72_13675Not AvailableNegative2975872 - 297686737131.5
type iv pilus modification protein pilvE5N72_13680Not AvailableNegative2976869 - 297742320068.1
response regulator transcription factorE5N72_13685Not AvailableNegative2977541 - 297824826240.9
alginate biosynthesis proteinE5N72_13690Not AvailableNegative2978248 - 297927338530.7
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseE5N72_13695Not AvailableNegative2979312 - 298024133869.1
fkbp-type peptidyl-prolyl cis-trans isomeraseE5N72_13700Not AvailableNegative2980241 - 298068115715.3
lipoprotein signal peptidaseE5N72_13705Not AvailableNegative2980678 - 298117818687.8

Displaying genes 2721 – 2730 of 4092 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.