Pseudoalteromonas sp. MEBiC 03607 3607_2_1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. MEBiC 03607 3607_2_1 is characterized as a rod-shaped bacterium. This morphological trait is significant as it can influence the organism's motility, surface attachment, and overall ecological interactions. The organism possesses a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability and efficiency in its environment. The accession number for Pseudoalteromonas sp. MEBiC 03607 is SRRY00000000.1, which serves as a reference for genomic sequencing and further research into its genetic makeup. This accession allows researchers to access genetic information that could provide insights into the metabolic capabilities and ecological roles of this species. Ecologically, Pseudoalteromonas species are known to inhabit marine environments, where they often play roles in nutrient cycling and can exhibit various interactions with other marine organisms. Understanding the traits of Pseudoalteromonas sp. MEBiC 03607 3607_2_1, including its rod shape and genetic organization, can help elucidate its potential functions in marine ecosystems, such as biodegradation, bioremediation, or symbiotic relationships. This highlights the importance of studying microbial species like Pseudoalteromonas sp. MEBiC 03607 within the broader context of marine microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. MEBiC 03607
Strain3607_2_1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. MEBiC 03607 3607_2_1, whole genome shotgun

Gene Summary

Adenine Count

1343790 bp

Thymine Count

1348520 bp

Guanine Count

940238 bp

Cytosine Count

929351 bp

Genome Length

4561899 bp

Protein-coding Genes

3957 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system f family proteinE5N72_05320Not AvailableNegative1165159 - 116638544392.2
fimbrial assembly proteinE5N72_05325Not AvailablePositive1166483 - 116712124814.5
pilinE5N72_05330Not AvailableNegative1167118 - 116754315440.6
prepilin-type n-terminal cleavage/methylation domain-containing proteinE5N72_05335Not AvailableNegative1167562 - 116797814165.1
carboxylating nicotinate-nucleotide diphosphorylaseE5N72_05340Not AvailableNegative1168474 - 116932230299.2
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdE5N72_05345Not AvailablePositive1169512 - 117005420473.1
beta-lactamase regulator ampeE5N72_05350Not AvailablePositive1170076 - 117092732110.6
pyruvate dehydrogenase complex transcriptional repressor pdhrE5N72_05355Not AvailablePositive1171351 - 117210027965.9
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeE5N72_05360Not AvailablePositive1172185 - 117485199627.3
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseE5N72_05365Not AvailablePositive1174861 - 117674765751.2

Displaying genes 1061 – 1070 of 4092 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.