Aliishimia ponticola strain MYP11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Aliishimia

Description

Aliishimia ponticola strain MYP11 is characterized by having a single replicon, which is indicative of its genomic structure. This strain is cataloged under the accession number SRKY00000000.1, signifying its unique identification in genomic databases. The streamlined genomic architecture, with only one replicon, may suggest an adaptation to specific ecological niches where such simplicity could confer advantages, such as rapid replication and efficient resource utilization. As a member of the Aliishimia genus, it is likely that A. ponticola strain MYP11 participates in specific ecological roles, potentially within marine environments, given the genus’s known associations with such habitats. Understanding the genomic properties of Aliishimia ponticola strain MYP11 could provide insights into its ecological interactions and evolutionary adaptations. The presence of a single replicon might reflect its evolutionary strategies in response to environmental pressures, emphasizing the importance of studying microbial genomes to unravel the complexities of microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAliishimia
SpeciesAliishimia ponticola
Strainstrain MYP11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliishimia ponticola strain MYP11 contig15, whole genome shotgun

Gene Summary

Adenine Count

778744 bp

Thymine Count

788941 bp

Guanine Count

1258276 bp

Cytosine Count

1250423 bp

Genome Length

4076386 bp

Protein-coding Genes

3815 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3320 domain-containing proteinE4Z66_18980Not AvailablePositive3951519 - 3957602222686.0
peptidoglycan-binding proteinE4Z66_18985Not AvailablePositive3957226 - 395897463381.2
hypothetical proteinE4Z66_18990Not AvailableNegative3959037 - 395960320782.7
hypothetical proteinE4Z66_18995Not AvailablePositive3959682 - 396034424093.8
imma/irre family metallo-endopeptidaseE4Z66_19000Not AvailablePositive3960344 - 396143840370.7
toll/interleukin-1 receptor domain-containing proteinE4Z66_19005Not AvailableNegative3961685 - 396239225093.8
duf2188 domain-containing proteinE4Z66_19010Not AvailableNegative3962449 - 39626708380.65
xre family transcriptional regulatorE4Z66_19015Not AvailablePositive3962829 - 396316412835.3
imma/irre family metallo-endopeptidaseE4Z66_19020Not AvailablePositive3963151 - 396400531547.6
fic family proteinE4Z66_19025Not AvailableNegative3964104 - 396533045608.7

Displaying genes 3771 – 3780 of 3881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.