Aliishimia ponticola strain MYP11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Aliishimia

Description

Aliishimia ponticola strain MYP11 is characterized by having a single replicon, which is indicative of its genomic structure. This strain is cataloged under the accession number SRKY00000000.1, signifying its unique identification in genomic databases. The streamlined genomic architecture, with only one replicon, may suggest an adaptation to specific ecological niches where such simplicity could confer advantages, such as rapid replication and efficient resource utilization. As a member of the Aliishimia genus, it is likely that A. ponticola strain MYP11 participates in specific ecological roles, potentially within marine environments, given the genus’s known associations with such habitats. Understanding the genomic properties of Aliishimia ponticola strain MYP11 could provide insights into its ecological interactions and evolutionary adaptations. The presence of a single replicon might reflect its evolutionary strategies in response to environmental pressures, emphasizing the importance of studying microbial genomes to unravel the complexities of microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAliishimia
SpeciesAliishimia ponticola
Strainstrain MYP11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliishimia ponticola strain MYP11 contig15, whole genome shotgun

Gene Summary

Adenine Count

778744 bp

Thymine Count

788941 bp

Guanine Count

1258276 bp

Cytosine Count

1250423 bp

Genome Length

4076386 bp

Protein-coding Genes

3815 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorE4Z66_18020Not AvailablePositive3769778 - 377115450594.1
duf2478 domain-containing proteinE4Z66_18025Not AvailablePositive3771188 - 377170918525.2
laci family dna-binding transcriptional regulatorE4Z66_18030Not AvailablePositive3771901 - 377298338163.9
xylose isomeraseE4Z66_18035Not AvailablePositive3772976 - 377427147970.5
sugar phosphate isomerase/epimeraseE4Z66_18040Not AvailablePositive3774291 - 377534639208.6
gfo/idh/moca family oxidoreductaseE4Z66_18045Not AvailablePositive3775367 - 377648239088.0
sugar abc transporter atp-binding proteinE4Z66_18050Not AvailablePositive3776479 - 377800254348.8
abc transporter permeaseE4Z66_18055Not AvailablePositive3778012 - 377901034503.5
abc transporter substrate-binding proteinE4Z66_18060Not AvailablePositive3779043 - 377999033560.8
transglutaminase family proteinE4Z66_18065Not AvailablePositive3780256 - 3783609125049.0

Displaying genes 3581 – 3590 of 3881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.