Aliishimia ponticola strain MYP11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Aliishimia

Description

Aliishimia ponticola strain MYP11 is characterized by having a single replicon, which is indicative of its genomic structure. This strain is cataloged under the accession number SRKY00000000.1, signifying its unique identification in genomic databases. The streamlined genomic architecture, with only one replicon, may suggest an adaptation to specific ecological niches where such simplicity could confer advantages, such as rapid replication and efficient resource utilization. As a member of the Aliishimia genus, it is likely that A. ponticola strain MYP11 participates in specific ecological roles, potentially within marine environments, given the genus’s known associations with such habitats. Understanding the genomic properties of Aliishimia ponticola strain MYP11 could provide insights into its ecological interactions and evolutionary adaptations. The presence of a single replicon might reflect its evolutionary strategies in response to environmental pressures, emphasizing the importance of studying microbial genomes to unravel the complexities of microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAliishimia
SpeciesAliishimia ponticola
Strainstrain MYP11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliishimia ponticola strain MYP11 contig15, whole genome shotgun

Gene Summary

Adenine Count

778744 bp

Thymine Count

788941 bp

Guanine Count

1258276 bp

Cytosine Count

1250423 bp

Genome Length

4076386 bp

Protein-coding Genes

3815 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit deltaE4Z66_00890Not AvailablePositive178631 - 17892110705.5
sarcosine oxidase subunit alpha family proteinE4Z66_00895Not AvailablePositive178918 - 181848105182.0
sarcosine oxidase subunit gammaE4Z66_00900Not AvailablePositive181841 - 18240419444.2
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldE4Z66_00905Not AvailablePositive182401 - 18329430892.6
formyltetrahydrofolate deformylaseE4Z66_00910Not AvailablePositive183381 - 18426532968.6
fadr family transcriptional regulatorE4Z66_00915Not AvailablePositive184410 - 18510825899.1
abc transporter substrate-binding proteinE4Z66_00920Not AvailableNegative185092 - 18638447442.0
nad(p)/fad-dependent oxidoreductaseE4Z66_00925Not AvailablePositive186553 - 18789951132.6
duf1989 domain-containing proteinE4Z66_00930Not AvailablePositive187942 - 19032686399.5
ammonium transporterE4Z66_00935Not AvailablePositive190396 - 19177848550.8

Displaying genes 201 – 210 of 3881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.