Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | strain 16763 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Danio rerio, Pancrustacea |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1461015 bp
Thymine Count
1460985 bp
Guanine Count
1187873 bp
Cytosine Count
1207651 bp
Genome Length
5317524 bp
Protein-coding Genes
4949 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrpe/yscl family type iii secretion apparatus protein | E4P16_20055 | Not Available | Negative | 4167863 - 4168501 | 23489.2 |
| type iii secretion protein | E4P16_20060 | Not Available | Negative | 4168480 - 4169193 | 27572.8 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | E4P16_20065 | Not Available | Negative | 4169138 - 4169884 | 27441.5 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | E4P16_20070 | Not Available | Negative | 4169884 - 4170228 | 12733.1 |
| yopr family type iii secretion effector | E4P16_20075 | Not Available | Negative | 4170237 - 4170863 | 23385.8 |
| yscg family type iii secretion protein | E4P16_20080 | Not Available | Negative | 4170860 - 4171219 | 13066.7 |
| escf/yscf/hrpa family type iii secretion system needle major subunit | E4P16_20085 | Not Available | Negative | 4171223 - 4171471 | 9154.75 |
| esce/ysce/ssae family type iii secretion system needle protein co-chaperone | E4P16_20090 | Not Available | Negative | 4171483 - 4171692 | 7792.37 |
| escd/yscd/hrpq family type iii secretion system inner membrane ring protein | E4P16_20095 | Not Available | Negative | 4171679 - 4172980 | 47975.3 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | E4P16_20100 | Not Available | Negative | 4172986 - 4174884 | 69380.9 |
Pathways
1153 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Vibriosis | Causes | PMC10472736 |
| Acute gastroenteritis | Causes | PMC11171697 |
| Wound infections | Causes | PMC11171697 |
| Septicemia | Causes | PMC11171697 |
| Food poisoning | Causes | PMC12108532 |
| Vibrio infections | Causes | PMC12108532 |
| Acute gastroenteritis | Causes | PMC12849298 |
| Wound infections | Causes | PMC12849298 |
| Ear infections | Causes | PMC12849298 |
| Septicemia | Causes | PMC12849298 |




