Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | strain 16763 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Danio rerio, Pancrustacea |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1461015 bp
Thymine Count
1460985 bp
Guanine Count
1187873 bp
Cytosine Count
1207651 bp
Genome Length
5317524 bp
Protein-coding Genes
4949 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | E4P16_15845 | Not Available | Negative | 3292173 - 3292835 | 24652.5 |
| duf493 family protein | E4P16_15850 | Not Available | Negative | 3293011 - 3293289 | 10301.6 |
| d-alanyl-d-alanine carboxypeptidase | E4P16_15855 | Not Available | Negative | 3293428 - 3294606 | 43293.7 |
| septal ring lytic transglycosylase rlpa family protein | E4P16_15860 | Not Available | Negative | 3294699 - 3295502 | 29746.0 |
| rod shape-determining protein roda | E4P16_15865 | Not Available | Negative | 3295505 - 3296626 | 40810.7 |
| penicillin-binding protein 2 | E4P16_15870 | Not Available | Negative | 3296626 - 3298551 | 73068.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | E4P16_15875 | Not Available | Negative | 3298581 - 3299051 | 17418.2 |
| ribosome silencing factor | E4P16_15880 | Not Available | Negative | 3299056 - 3299373 | 11852.2 |
| dna polymerase iii subunit delta | E4P16_15885 | Not Available | Negative | 3299464 - 3300483 | 38903.2 |
| luciferase | E4P16_15890 | Not Available | Negative | 3300489 - 3301031 | 20472.6 |
Pathways
1153 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Vibriosis | Causes | PMC10472736 |
| Acute gastroenteritis | Causes | PMC11171697 |
| Wound infections | Causes | PMC11171697 |
| Septicemia | Causes | PMC11171697 |
| Food poisoning | Causes | PMC12108532 |
| Vibrio infections | Causes | PMC12108532 |
| Acute gastroenteritis | Causes | PMC12849298 |
| Wound infections | Causes | PMC12849298 |
| Ear infections | Causes | PMC12849298 |
| Septicemia | Causes | PMC12849298 |




