Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-amino-3,8-dideoxy-alpha-d-manno-octulosonate transaminase | EDB95_0782 | Not Available | Negative | 872809 - 874029 | 44368.1 |
| uncharacterized lipoprotein yddw (upf0748 family) | EDB95_0783 | Not Available | Negative | 874106 - 875662 | 58951.7 |
| dna-binding marr family transcriptional regulator | EDB95_0784 | Not Available | Negative | 875664 - 876113 | 17201.2 |
| dinb family protein | EDB95_0785 | Not Available | Negative | 876110 - 876565 | 17672.0 |
| radical sam protein with 4fe4s-binding spasm domain | EDB95_0786 | Not Available | Negative | 876562 - 877587 | 39589.2 |
| marr family transcriptional regulator | EDB95_0787 | Not Available | Positive | 877653 - 878093 | 17008.4 |
| hypothetical protein | EDB95_0788 | Not Available | Positive | 878103 - 879899 | 65227.6 |
| 6-phosphogluconolactonase | EDB95_0789 | Not Available | Negative | 880212 - 880955 | 28136.7 |
| glucose-6-phosphate 1-dehydrogenase | EDB95_0790 | Not Available | Negative | 880981 - 882492 | 57827.8 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | EDB95_0791 | Not Available | Negative | 882505 - 883920 | 51310.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
