Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein yccc | EDB95_0552 | Not Available | Positive | 612424 - 614580 | 80771.9 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | EDB95_0553 | Not Available | Negative | 614599 - 616443 | 67337.9 |
| dna-3-methyladenine glycosylase ii | EDB95_0554 | Not Available | Negative | 616547 - 617167 | 23321.6 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | EDB95_0555 | Not Available | Positive | 617254 - 618066 | 31049.4 |
| uncharacterized protein (tigr00661 family) | EDB95_0556 | Not Available | Positive | 618087 - 619253 | 44482.1 |
| cysteinyl-trna synthetase | EDB95_0557 | Not Available | Negative | 619184 - 620752 | 59517.0 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | EDB95_0558 | Not Available | Negative | 620946 - 622094 | 44282.2 |
| membrane associated rhomboid family serine protease | EDB95_0559 | Not Available | Negative | 622100 - 623035 | 34814.6 |
| membrane associated rhomboid family serine protease | EDB95_0560 | Not Available | Negative | 623108 - 623827 | 27011.3 |
| 23s rrna (uracil1939-c5)-methyltransferase | EDB95_0561 | Not Available | Negative | 623871 - 625268 | 52755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
