Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | EDB95_0522 | Not Available | Positive | 585383 - 586048 | 23829.4 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | EDB95_0523 | Not Available | Positive | 586032 - 586775 | 26065.5 |
| hypothetical protein | EDB95_0524 | Not Available | Negative | 586730 - 586888 | 6305.77 |
| dna-binding transcriptional arsr family regulator | EDB95_0525 | Not Available | Positive | 586915 - 587265 | 13367.5 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDB95_0526 | Not Available | Positive | 587355 - 588761 | 50960.5 |
| rna polymerase sigma factor (sigma-70 family) | EDB95_0527 | Not Available | Positive | 588873 - 589415 | 20775.3 |
| hypothetical protein | EDB95_0528 | Not Available | Positive | 589418 - 591352 | 73182.2 |
| phosphate abc transporter substrate-binding protein (phot family) | EDB95_0529 | Not Available | Negative | 591354 - 592427 | 37139.5 |
| kdo2-lipid iv(a) lauroyltransferase | EDB95_0530 | Not Available | Negative | 592488 - 593405 | 35890.4 |
| l-aspartate oxidase | EDB95_0531 | Not Available | Negative | 593405 - 595000 | 59153.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
