Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | EDB95_0412 | Not Available | Positive | 461406 - 463367 | 72320.3 |
| condensin subunit scpa | EDB95_0413 | Not Available | Negative | 463374 - 464150 | 30098.6 |
| duf3078 family protein | EDB95_0414 | Not Available | Negative | 464178 - 465110 | 34541.9 |
| large conductance mechanosensitive channel | EDB95_0415 | Not Available | Negative | 465116 - 465562 | 16115.9 |
| ppk2 family polyphosphate:nucleotide phosphotransferase | EDB95_0416 | Not Available | Negative | 465583 - 466329 | 29067.9 |
| ribosome recycling factor | EDB95_0417 | Not Available | Negative | 466362 - 466925 | 20939.3 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | EDB95_0418 | Not Available | Negative | 467006 - 468208 | 42879.7 |
| transketolase | EDB95_0419 | Not Available | Positive | 468494 - 469327 | 30304.1 |
| lipoprotein-releasing system permease protein | EDB95_0420 | Not Available | Negative | 469538 - 470761 | 44477.5 |
| ribosome-binding factor a | EDB95_0421 | Not Available | Negative | 470764 - 471141 | 14644.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
