Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | EDB95_0362 | Not Available | Positive | 413630 - 416086 | 92246.0 |
| signal peptidase ii | EDB95_0363 | Not Available | Positive | 416115 - 416777 | 25082.9 |
| fumarase class ii | EDB95_0364 | Not Available | Negative | 416921 - 418324 | 50248.7 |
| precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | EDB95_0365 | Not Available | Negative | 418357 - 418944 | 21677.6 |
| uroporphyrin-iii c-methyltransferase | EDB95_0366 | Not Available | Negative | 418941 - 419726 | 28176.5 |
| sulfite reductase (ferredoxin) | EDB95_0367 | Not Available | Negative | 419732 - 421861 | 79439.0 |
| enoyl-coa hydratase | EDB95_0368 | Not Available | Negative | 422197 - 422967 | 26788.4 |
| glutamyl-trna synthetase | EDB95_0369 | Not Available | Negative | 423009 - 424544 | 58305.9 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | EDB95_0370 | Not Available | Positive | 424574 - 425200 | 24029.2 |
| hypothetical protein | EDB95_0371 | Not Available | Negative | 425351 - 426244 | 31002.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
