Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4399 | EDB95_2359 | Not Available | Positive | 2653905 - 2654423 | 17608.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | EDB95_2360 | Not Available | Positive | 2654537 - 2655073 | 20480.6 |
| fecr family protein | EDB95_2361 | Not Available | Positive | 2655187 - 2656461 | 45291.8 |
| tonb-linked susc/raga family outer membrane protein | EDB95_2362 | Not Available | Positive | 2656587 - 2659958 | 123205.0 |
| putative outer membrane starch-binding protein | EDB95_2363 | Not Available | Positive | 2659977 - 2661587 | 59843.1 |
| suse-like outer membrane protein | EDB95_2364 | Not Available | Positive | 2661599 - 2662732 | 41110.8 |
| putative alpha-1,6-mannanase (gh76 family) | EDB95_2365 | Not Available | Positive | 2662739 - 2663872 | 41918.8 |
| putative hydrolase of the had superfamily | EDB95_2366 | Not Available | Positive | 2663936 - 2664562 | 23997.8 |
| abc-type antimicrobial peptide transport system permease subunit | EDB95_2367 | Not Available | Negative | 2664579 - 2666945 | 86908.2 |
| rimj/riml family protein n-acetyltransferase | EDB95_2368 | Not Available | Negative | 2667000 - 2667614 | 23907.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
