Dinghuibacter silviterrae strain DSM 100059

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Dinghuibacter

Description

Dinghuibacter silviterrae strain DSM 100059 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Its genomic structure is marked by a single replicon, and it is cataloged under the accession number SODV00000000.1. As a member of the microbial community, Dinghuibacter silviterrae may play a role in various ecological processes, potentially contributing to nutrient cycling in its habitat. The aerobic nature of this bacterium suggests it requires oxygen for growth, which may influence its distribution in environments where oxygen levels are variable. The optimal growth temperature of 29°C indicates that it may be well adapted to moderate thermal conditions, promoting its survival and activity in temperate ecosystems. The non-motility of Dinghuibacter silviterrae could limit its ability to actively seek out resources or escape unfavorable conditions; however, it may rely on passive dispersal mechanisms. Understanding the ecological roles and interactions of such microbes can provide insights into the dynamics of microbial communities and their influence on ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusDinghuibacter
SpeciesDinghuibacter silviterrae
Strainstrain DSM 100059

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dinghuibacter silviterrae strain DSM 100059 Ga0244717_14, whole

Gene Summary

Adenine Count

1446260 bp

Thymine Count

1427555 bp

Guanine Count

1808983 bp

Cytosine Count

1814377 bp

Genome Length

6497175 bp

Protein-coding Genes

5399 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atpase family protein associated with various cellular activities (aaa)EDB95_2339Not AvailablePositive2624784 - 262585740735.4
pp_02319EDB95_2340Not AvailablePositive2625868 - 2627265Not Available
putative abc transport system permease proteinEDB95_2341Not AvailableNegative2627360 - 262980490107.1
tonb-dependent receptorEDB95_2342Not AvailablePositive2630063 - 2632795102088.0
parallel beta helix pectate lyase-like proteinEDB95_2343Not AvailablePositive2632810 - 263397340859.9
beta-glucosidaseEDB95_2344Not AvailablePositive2634096 - 263637282146.8
yvtn family beta-propeller proteinEDB95_2345Not AvailableNegative2636369 - 263875086380.5
molybdate transport system atp-binding proteinEDB95_2346Not AvailableNegative2638927 - 263958323960.1
molybdate transport system permease proteinEDB95_2347Not AvailableNegative2639580 - 264025724679.9
molybdate transport system substrate-binding proteinEDB95_2348Not AvailableNegative2640263 - 264101227078.4

Displaying genes 2331 – 2340 of 2402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.