Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | EDB95_0202 | Not Available | Negative | 234172 - 236274 | 79362.2 |
| putative mg2+ transporter-c (mgtc) family protein | EDB95_0203 | Not Available | Negative | 236300 - 236935 | 22967.7 |
| hypothetical protein | EDB95_0204 | Not Available | Negative | 236935 - 237678 | 27546.7 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | EDB95_0205 | Not Available | Positive | 237749 - 239314 | 59290.6 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolase | EDB95_0206 | Not Available | Negative | 239340 - 239999 | 24029.3 |
| 2-dehydro-3-deoxygluconokinase | EDB95_0207 | Not Available | Negative | 239992 - 241068 | 38838.2 |
| glucuronate isomerase | EDB95_0208 | Not Available | Negative | 241065 - 242465 | 53344.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | EDB95_0209 | Not Available | Positive | 242594 - 243130 | 20594.9 |
| fecr family protein | EDB95_0210 | Not Available | Positive | 243182 - 244168 | 36900.6 |
| tonb-linked susc/raga family outer membrane protein | EDB95_0211 | Not Available | Positive | 244175 - 247663 | 127411.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
