Dinghuibacter silviterrae strain DSM 100059

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Dinghuibacter

Description

Dinghuibacter silviterrae strain DSM 100059 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain thrives optimally at a temperature of 29°C, situating it within the mesophilic temperature range. Its genomic structure is marked by a single replicon, and it is cataloged under the accession number SODV00000000.1. As a member of the microbial community, Dinghuibacter silviterrae may play a role in various ecological processes, potentially contributing to nutrient cycling in its habitat. The aerobic nature of this bacterium suggests it requires oxygen for growth, which may influence its distribution in environments where oxygen levels are variable. The optimal growth temperature of 29°C indicates that it may be well adapted to moderate thermal conditions, promoting its survival and activity in temperate ecosystems. The non-motility of Dinghuibacter silviterrae could limit its ability to actively seek out resources or escape unfavorable conditions; however, it may rely on passive dispersal mechanisms. Understanding the ecological roles and interactions of such microbes can provide insights into the dynamics of microbial communities and their influence on ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusDinghuibacter
SpeciesDinghuibacter silviterrae
Strainstrain DSM 100059

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dinghuibacter silviterrae strain DSM 100059 Ga0244717_14, whole

Gene Summary

Adenine Count

1446260 bp

Thymine Count

1427555 bp

Guanine Count

1808983 bp

Cytosine Count

1814377 bp

Genome Length

6497175 bp

Protein-coding Genes

5399 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gmp synthase-like glutamine amidotransferaseEDB95_2067Not AvailableNegative2281097 - 228188830458.4
d-amino-acid:oxygen oxidoreductase (deaminating)EDB95_2068Not AvailableNegative2281899 - 228286434705.3
hypothetical proteinEDB95_2069Not AvailableNegative2282876 - 228380532245.3
hypothetical proteinEDB95_2070Not AvailableNegative2283805 - 228519349996.9
rna polymerase sigma-70 factor (ecf subfamily)EDB95_2071Not AvailableNegative2285190 - 228573220909.6
carboxylate-amine ligaseEDB95_2072Not AvailableNegative2285759 - 228687442461.7
glutathione synthase/rimk-type ligase-like atp-grasp enzymeEDB95_2073Not AvailableNegative2286907 - 228786335847.9
esterase/lipase superfamily enzymeEDB95_2074Not AvailableNegative2287908 - 228862427565.6
putative alpha/beta superfamily hydrolaseEDB95_2075Not AvailablePositive2288653 - 228945329952.4
phosphoenolpyruvate carboxylase type 1EDB95_2076Not AvailableNegative2289471 - 229205397018.3

Displaying genes 2061 – 2070 of 2402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.