Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase ycbb/ykud | EDB95_2047 | Not Available | Positive | 2260962 - 2262656 | 64772.1 |
| rare lipoprotein a | EDB95_2048 | Not Available | Positive | 2262696 - 2263073 | 14210.7 |
| hypothetical protein | EDB95_2049 | Not Available | Positive | 2263105 - 2263710 | 22159.6 |
| 2-methylisocitrate lyase-like pep mutase family enzyme | EDB95_2050 | Not Available | Negative | 2263715 - 2264437 | 25980.4 |
| duf2911 family protein | EDB95_2051 | Not Available | Negative | 2264503 - 2265048 | 19529.3 |
| penicillin-binding protein 1a | EDB95_2052 | Not Available | Negative | 2265063 - 2267435 | 88875.1 |
| hypothetical protein | EDB95_2053 | Not Available | Negative | 2267489 - 2270476 | 111841.0 |
| hypothetical protein | EDB95_2054 | Not Available | Positive | 2270566 - 2270961 | 15248.6 |
| cytoskeletal protein ccma (bactofilin family) | EDB95_2055 | Not Available | Positive | 2270987 - 2271439 | 15410.2 |
| hypothetical protein | EDB95_2056 | Not Available | Positive | 2271423 - 2271629 | 7522.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
