Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Dinghuibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Dinghuibacter |
| Species | Dinghuibacter silviterrae |
| Strain | strain DSM 100059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1446260 bp
Thymine Count
1427555 bp
Guanine Count
1808983 bp
Cytosine Count
1814377 bp
Genome Length
6497175 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yxwgxw repeat-containing protein | EDB95_1887 | Not Available | Positive | 2071825 - 2072991 | 40839.2 |
| radical sam superfamily enzyme ygiq (upf0313 family) | EDB95_1888 | Not Available | Negative | 2073067 - 2075331 | 84118.9 |
| putative rmd1/yage family protein | EDB95_1889 | Not Available | Positive | 2075375 - 2076154 | 30182.1 |
| alpha-l-rhamnosidase | EDB95_1890 | Not Available | Positive | 2076265 - 2078949 | 98956.6 |
| abc-type antimicrobial peptide transport system permease subunit | EDB95_1891 | Not Available | Negative | 2078978 - 2081665 | 100066.0 |
| uncharacterized protein yndb with ahsa1/start domain | EDB95_1892 | Not Available | Positive | 2081747 - 2082175 | 16291.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | EDB95_1893 | Not Available | Positive | 2082187 - 2082747 | 21312.1 |
| fecr family protein | EDB95_1894 | Not Available | Positive | 2082851 - 2083915 | 39911.8 |
| tonb-linked susc/raga family outer membrane protein | EDB95_1895 | Not Available | Positive | 2084125 - 2087553 | 124725.0 |
| putative outer membrane starch-binding protein | EDB95_1896 | Not Available | Positive | 2087580 - 2089247 | 61927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
